Difference between revisions of "Ontology for Parasite Life Cycle"
Line 435: | Line 435: | ||
<li>[[Phlebotominae Midgut]]</li> | <li>[[Phlebotominae Midgut]]</li> | ||
<li>[[Plasmodium]]</li> | <li>[[Plasmodium]]</li> | ||
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Erythrocytic Schizont]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Erythrocytic Schizont Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Exflagellated Microgametocyte]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Gametocyte Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Hepatic Schizont]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Hepatic Schizont Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Lifecycle Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Macrogamete]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Macrogamete Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Macrogametocyte]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Macrogametocyte Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Merozoite]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Merozoite Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Microgamete]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Microgamete Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Microgametocyte]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Microgametocyte Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Oocyst]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Oocyst Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Ookinete]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Ookinete Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Ring Trophozoite]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Ring Trophozoite Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Schizont Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Sporozoite]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Sporozoite Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Trophozoite]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Trophozoite Stage]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Zygote]]</li> |
− | <li>[[Plasmodium | + | <li>[[Plasmodium falciparum Zygote Stage]]</li> |
<li>[[Proboscis]]</li> | <li>[[Proboscis]]</li> | ||
<li>[[Processual Entity]]</li> | <li>[[Processual Entity]]</li> |
Revision as of 18:42, 4 February 2011
What is Parasite Lifecycle Ontology (PLO)? |
PLO models the life cycle stage details of T.cruzi and two related kinetoplastids, Trypanosoma brucei and Leishmania major. In addition, the ontology also models necessary contextual details such as host information, vector information, strain and anatomical location. All the entities in the ontology are linked to each other by explicitly modeled named relationships that will enable software applications to accurately interpret data annotated with this ontology. For example, “Trypanosoma_cruzi→has_vector_organism→triatominae”. The PLO is modeled in the W3C Web Ontology Language (OWL) standard and currently has 41 classes and 5 properties with a description logic expressivity of ALU. PLO (ver 0.1) is released through NCBO’s BioPortal repository for public use. |
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![]() Snapshot of class hierarchy of the parasite life cycle ontology using Protege toolkit. Detail of this ontology is available at NCBO BioPortal |
Organisms in PLO | ||||||
Here is brief description and life-cycles of the organisms that are covered in PLO.
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Feedback/Comments |
Please add feedback/comments in Discussion Section on the top of this wiki page. |