Difference between revisions of "TcruziSPSE Team"

Revision as of 20:09, 20 May 2010

Kno.e.sis Center, Wright State University

Principal Investigator:

Amit Sheth -- Dr. Amit Sheth is the LexisNexis Ohio Eminent Scholar and a Director of the Kno.e.sis center at Wright State University. He is the Principal Investigator (PI) of this project.

Postdoc:

Priti Parikh-- Priti is a Postdoctoral Research Fellow at the Kno.e.Sis Center with Biological Science expertise. Priti helps with development and extension of ontologies, and a query processing tool, Cuebee.

Students:

Satya Sahoo -- led the creation of the two ontologies used in this project namely, Parasite Experiment ontology, Parasite Experiment ontology in collaboration the biology domain experts. Also created the Provenir upper-level provenance ontology that has been extended to create the Parasite Experiment ontology.
Vinh Nguyen -- used Parasite Experiment ontology to convert the experimental data in relational DB and CSV to RDF format and ran biological queries.
Ajith Ranabahu
Pablo Mendes -- created the concept and developed Cuebee, a system for knowledge driven query formulation. Also collaborated with Dr. Davila and Rodrigo Jardim towards integrating genomic databases and other knowledge sources, as well as for the execution of complex queries involving rules.

Tarleton Research Group, Center for Tropical and Emerging Global Diseases(CTEGD), University of Georgia

Rick Tarleton-- Dr. Rick Tarleton is a Distinguished Research Professor in the Department of Cellular Biology at UGA. He is also a Co-PI of this project.
Todd Minning -- Todd is an Assitant Research Scientist at the Tarleton Research Lab. He is involved in sharing lab data and evaluation of Cuebee as per the lab requirements.

Large-Scale Distributed Information Systems (LSDIS) Lab at the University of Georgia

Prashant Doshi-- Dr. Prashant Doshi is an assistant professor of Computer Science at UGA and a co-investigator in this project.
Amir Asiaee -- Amir is a doctoral student in the Computer Science department of UGA and a graduate research assistant in this project.

Amir and Prashant are involved in the research and development of Cuebee, which is a system for querying biological data semantically.

The Wellcome Trust Sanger Institute, UK

Flora Logan -- Flora is a [add titile] at the Sanger Institute, UK. Previously Flora worked as a Postdoc at the Tarleton Research Lab where she was primarily involved in development of PEO and PLO. Now Flora collaborates with Kno.e.sis team to extend both these ontologies with other human parasites, such as Plasmodium sp.

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    |title= [http://www.sanger.ac.uk/ The Wellcome Trust Sanger Institute], UK
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+   |content= *Flora Logan -- Flora is a [add titile] at the Sanger Institute, UK.  Previously Flora worked as a Postdoc at the Tarleton Research Lab where she was primarily involved in development of PEO and PLO.  Now Flora collaborates with Kno.e.sis team to extend both these ontologies with other human parasites, such as Plasmodium sp.
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