Difference between revisions of "Ontology for Parasite Life Cycle"
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All the entities in the ontology are linked to each other by explicitly modeled named relationship that will enable software applications to accurately interpret data annotated with this ontology. For example, “Trypanosoma_cruzi→has_vector_organism(named relationship)→triatominae”. The parasite life cycle ontology is modeled in the World Wide Web consortium (W3C) Web Ontology Language (OWL) standard and currently has 41 classes and 5 properties with a description logic (DL) expressivity of ALU. The ontology, along with its Wiki-based resource page will be released for listing and public use at NCBO in the latter half of this month (February, 2009). We expect this ontology to replace the current [http://www.sanger.ac.uk/Users/mb4/PLO/ prototype ontology] modeling parasite life cycle for which development effort has apparently been discontinued since 2002. | All the entities in the ontology are linked to each other by explicitly modeled named relationship that will enable software applications to accurately interpret data annotated with this ontology. For example, “Trypanosoma_cruzi→has_vector_organism(named relationship)→triatominae”. The parasite life cycle ontology is modeled in the World Wide Web consortium (W3C) Web Ontology Language (OWL) standard and currently has 41 classes and 5 properties with a description logic (DL) expressivity of ALU. The ontology, along with its Wiki-based resource page will be released for listing and public use at NCBO in the latter half of this month (February, 2009). We expect this ontology to replace the current [http://www.sanger.ac.uk/Users/mb4/PLO/ prototype ontology] modeling parasite life cycle for which development effort has apparently been discontinued since 2002. | ||
| − | [[Image:Snapshot_of_Parasite_Life_Cycle_ontology_in_Protege_toolkit | right | Snapshot of TcruziExperiri ontology in Protege toolkit]] | + | [[Image:Snapshot_of_Parasite_Life_Cycle_ontology_in_Protege_toolkit.gif | right | Snapshot of TcruziExperiri ontology in Protege toolkit]] |
== ontology classes == | == ontology classes == | ||
Revision as of 23:31, 12 February 2009
All the entities in the ontology are linked to each other by explicitly modeled named relationship that will enable software applications to accurately interpret data annotated with this ontology. For example, “Trypanosoma_cruzi→has_vector_organism(named relationship)→triatominae”. The parasite life cycle ontology is modeled in the World Wide Web consortium (W3C) Web Ontology Language (OWL) standard and currently has 41 classes and 5 properties with a description logic (DL) expressivity of ALU. The ontology, along with its Wiki-based resource page will be released for listing and public use at NCBO in the latter half of this month (February, 2009). We expect this ontology to replace the current prototype ontology modeling parasite life cycle for which development effort has apparently been discontinued since 2002.
ontology classes
table width=100%
tr valign=top
td
- A
ul liAmastigote/li liAnatomical Location /li /ul
- B
ul
liBlood stream form/li
liBloodstream/li
/ul
- C
ul
liChagas disease/li
/ul
- D
ul
liDog/li
/ul
- E
ul
liEpimastigote/li
/ul
- H
ul
liHindgut/li
liHost organism/li
liHuman/li
/ul
- K
ul
liKinetoplastid/li
/ul
- L
ul
liLeishmania/li
/ul
/td
td
- L cont.
ul
liLeishmaniasis/li
liLifecycle stage/li
liLutzomyia/li
/ul
- M
ul
liMacrophage/li
liMetacyclic/li
liMice/li
liMidgut/li
/ul
- N
ul
liNew World/li
liNucleated Cell/li
/ul
- O
ul
liOld World/li
liOntology/li
liOrganism/li
/ul
- P
ul
liParasitic organism/li
/ul
/td
td
- P cont.
ul
liPhlebotomus/li
liProcyclic/li
liPromastigote/li
/ul
- S
ul
liSalivary Gland/li
liSand fly/li
liSleeping sickness/li
liStrains/li
/ul
- T
ul
liTriatomine/li
liTrypanosoma brucei/li
liTrypanosoma cruzi/li
liTrypomastigote/li
liTsetse fly/li
/ul
- V
ul
liVector organism/li
/ul
/td
/tr
/table
Collaborating Institutions
br/
We invite new members to collaborate with us in extending this ontology.
Feedback/Comments
Please add feedback/comments in Discussion Section on the top of this wiki page.
