Difference between revisions of "Knowledge-Aware-Search"
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− | This wiki contains supplementary materials for the research article currently under review entitled '''Knowledge-Aware Search.''' This work was developed as part of the [http://wiki.knoesis.org/index.php/PREDOSE PREDOSE] project, which is an inter-disciplinary project between the [http://knoesis.org Ohio Center of Excellence in Knowledge-enabled Computing (Kno.e.sis)] and the [http://www.med.wright.edu/citar/ Center for Interventions, Treatment and Addictions Research (CITAR)] at [http://wright.edu/ Wright State University]. PREDOSE is the acronym for '''PRE'''scription '''D'''rug abuse '''O'''nline '''S'''urveillance and '''E'''pidemiology. | + | This wiki contains supplementary materials for the research article currently under review entitled '''Knowledge-Aware Search.''' This work was developed as part of the [http://wiki.knoesis.org/index.php/PREDOSE PREDOSE] project, which is an inter-disciplinary project between the [http://knoesis.org Ohio Center of Excellence in Knowledge-enabled Computing (Kno.e.sis)] and the [http://www.med.wright.edu/citar/ Center for Interventions, Treatment and Addictions Research (CITAR)] at [http://wright.edu/ Wright State University]. PREDOSE is the acronym for '''PRE'''scription '''D'''rug abuse '''O'''nline '''S'''urveillance and '''E'''pidemiology. |
=Overview= | =Overview= | ||
Line 359: | Line 359: | ||
====SIDEEFFECT==== | ====SIDEEFFECT==== | ||
{| style="width: 70%; height: 200px" border="1" | {| style="width: 70%; height: 200px" border="1" | ||
− | | style="width: 200px;" | ''MILD'' || | bruising | itching | itching of skin | tingling | tingling in arms | tingling in hands | tingling legs | tingling in body parts | burning in fingers | burning in toes | burning in feet | burning in body parts | changes in behavior | cold | cold hands | cold feet | numbing of hands | numbing of feet | numbing of fingers | numbness of hands | numbness in feet | numbness in toes | numbness in fingers | nodding | muscle pain | muscle stiffness | muscle cramps | muscle weakness | muscle aches | muscle tenderness | loss of appetite | loss of thirst | lightheadedness | light-colored stool | redness | leg redness | swelling of the eyelid | redness of the eyelid | light-colored bowel movement | leg pain | leg swelling | leg tenderness | lack of sweating | lack of energy | itching sensation | burning sensation | irritation at the site of application | irritation at the injection site | increased thirst | increased sensitivity to light | increased sensitivity to glare | increased sensitivity to sun | inability to pass gas | inability to have a bowel movement | ill effects | hoarseness | frequent urination | frequent urge to urinate | tiredness | sore throat | fertility problem | pain in arm | pain in leg | pain in the back | pain in side | temporary blurred vision | pain in stomach | pain in the joints | pain in the upper right part of the stomach | fatigue | feeling anxious | aching pain in the hips | aching pain in the groin | difficulty doing exercise | aching pain in the thighs | swelling in the big toe | pale stools | dark stools | black stools | pale skin | paleness | paleness of tongue | paleness of lips | paleness of palms | | + | | style="width: 200px;" | ''MILD'' || | bruising | itching | itching of skin | tingling | tingling in arms | tingling in hands | tingling legs | tingling in body parts | burning in fingers | burning in toes | burning in feet | burning in body parts | changes in behavior | cold | cold hands | cold feet | numbing of hands | numbing of feet | numbing of fingers | numbness of hands | numbness in feet | numbness in toes | numbness in fingers | nodding | muscle pain | muscle stiffness | muscle cramps | muscle weakness | muscle aches | muscle tenderness | loss of appetite | loss of thirst | lightheadedness | light-colored stool | redness | leg redness | swelling of the eyelid | redness of the eyelid | light-colored bowel movement | leg pain | leg swelling | leg tenderness | lack of sweating | lack of energy | itching sensation | burning sensation | irritation at the site of application | irritation at the injection site | increased thirst | increased sensitivity to light | increased sensitivity to glare | increased sensitivity to sun | inability to pass gas | inability to have a bowel movement | ill effects | hoarseness | frequent urination | frequent urge to urinate | tiredness | sore throat | fertility problem | pain in arm | pain in leg | pain in the back | pain in side | temporary blurred vision | pain in stomach | pain in the joints | pain in the upper right part of the stomach | fatigue | feeling anxious | aching pain in the hips | aching pain in the groin | difficulty doing exercise | aching pain in the thighs | swelling in the big toe | pale stools | dark stools | black stools | pale skin | paleness | paleness of tongue | paleness of lips | paleness of palms | gray |
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Revision as of 20:43, 12 May 2013
This wiki contains supplementary materials for the research article currently under review entitled Knowledge-Aware Search. This work was developed as part of the PREDOSE project, which is an inter-disciplinary project between the Ohio Center of Excellence in Knowledge-enabled Computing (Kno.e.sis) and the Center for Interventions, Treatment and Addictions Research (CITAR) at Wright State University. PREDOSE is the acronym for PREscription Drug abuse Online Surveillance and Epidemiology.
Contents
Overview
People
Delroy Cameron
Nishita Jaykumar
Gary A. Smith
Gaurish Anand
Swapnil Soni
Krishnaprasad Thirunarayan
Kera Z. Watkins
Amit P. Sheth
Framework
Ontology
Context-Free Grammar and Query Language Specification
LEGEND
RULES | |
ONTOLOGY | |
LEXICON | |
LEXICON/ONTOLOGY | |
EXAMPLES |
Primary Nonterminals
Class Name | Class Source | Class Type |
INTERVAL | Alphabet | Compound |
FREQUENCY | Alphabet | Compound |
DOSAGE | Alphabet | Compound |
ENTITY | Ontology | Simple |
ROA (Route-Of-Administration) | Lexicon/Ontology | Simple |
DRUGFORM | Lexicon/Ontology | Simple |
SIDEEFFECT | Lexicon/Ontology | Simple |
EMOTION | Lexicon | Simple |
PRONOUN | Lexicon | Simple |
INTENSITY | Lexicon | Simple |
SENTIMENT | Lexicon | Simple |
Ubiquitous Nonterminals
EQUIVALENCE
> | greater than | more than | above | in excess of | slightly above | little more | bit more | slightly more | high | higher | highest | higher than | |
< | less than | lower than | below | in lack of | slightly below | little less | bit less | slightly less | |
= | exactly | precisely | |
>= | greater than or equal to | more than | above | in excess of | slightly above | little more | bit more | slightly more | exactly | precisely | high | higher | highest | higher than | |
<= | less than or equal to | less than | lower than | below | in lack of | slightly below | little less | bit less | slightly less | exactly | precisely |
DEFINITIONS
NUMERIC_AMOUNT | -999.99 | ... | 0 | ... | 3-4 | ... | 24/7 | 999 | |
WORDED_AMOUNT | one | once | two | twice | three | thrice | four | five | six | seven | eight | nine | ten | eleven | twelve | thirteen | fourteen | fifteen | sixteen | seventeen | eighteen | nineteen | twenty | thirty | forty | fifty | sixty | seventy | eighty | ninty | hundred | |
NUMBER | 0 | 1 | ... | 100 | |
AMOUNT | NUMBER | WORDED_AMOUNT | |
RANGE | [0 - NUMBER] WORDS |
Ontology Nonterminals
Buprenorphine | addnok | bup | bupe | bupes | bupey | buprel | buprenex | buprenorphine | buprenorphine analgesic | buprenorphine opioid dependence | buprenorphone | buprigesic | bups | butrans | film | films | morgesic | norspan | probuphine | saboxine | sobos | strip | strips | sub | subbies | subox | suboxene | suboxone | suboxone film | suboxone tablet | subs | subutex | tecs | temgesic | tex | tidigesic | xone | |
Heroin |
Grammar Alphabet Nonterminals
INTERVAL
PAST_DETERMINER | ago | prior | previous | since | before | last | past | ||
PRESENT_DETERMINER | now | about | around | several | couple | every | all | this | ||
FUTURE_DETERMINER | next | later | after | ||
PERIOD | PAST_DETERMINER | PRESENT_DETERMINER | FUTURE_DETERMINER | ||
TIME_INDICATOR | |||
HOUR | hour | hours | hr | hrs | ||
MINUTE | minute | minutes | min | mins | ||
SECOND | second | seconds | sec | secs | ||
DURATION_INDICATOR | |||
DECADE | decade | decades | ||
YEAR | year | years | yr | yrs | annum | ||
MONTH | month | months | mth| mths | mo | ||
WEEK | week | weeks| wk | wks | ||
DAY | day | days | night | nights | nite | nites | morning | mornings | mornin | evening | evenin | evenings | afternoon | noon | ||
DURATION_PERIOD | PAST_DETERMINER RANGE PERIOD | years ago, weeks prior | |
PRESENT_DETERMINER RANGE PERIOD | weeks now | ||
FUTURE_DETERMINER RANGE PERIOD | weeks later, days after | ||
PERIOD_DURATION | PAST_DETERMINER RANGE DURATION_INDICATOR | last year, previous day | |
PRESENT_DETERMINER RANGE DURATION_INDICATOR | about a year, around a month | ||
FUTURE_DETERMINER RANGE DURATION_INDICATOR | later years, next day | ||
TIME_PERIOD | TIME_INDICATOR RANGE PAST_DETERMINER | hours ago, minutes before | |
TIME_INDICATOR RANGE PRESENT_DETERMINER | hours now | ||
TIME_INDICATOR RANGE FUTURE_DETERMINER | hours later, minutes after | ||
PERIOD_TIME | PAST_DETERMINER RANGE TIME_INDICATOR | last hour | |
PRESENT_DETERMINER RANGE TIME_INDICATOR | several hours, couple of minutes | ||
FUTURE_DETERMINER RANGE TIME_INDICATOR | next hour | ||
AMOUNT_TIME_PERIOD | AMOUNT RANGE TIME_PAST_PERIOD | 5 minutes ago | |
AMOUNT RANGE TIME_PRESENT_PERIOD | 10 hours now | ||
AMOUNT RANGE TIME_FUTURE_PERIOD | 5 minutes later | ||
AMOUNT_TIME | AMOUNT RANGE TIME_INDICATOR | 15 seconds | |
PERIOD_AMOUNT_TIME | PAST_DETERMINER RANGE AMOUNT_TIME | last 2 hours, past 2 minutes | |
PRESENT_DETERMINER RANGE AMOUNT_TIME | around 2 hours | ||
FUTURE_DETERMINER RANGE AMOUNT_TIME | next 15 seconds, after 2 minutes | ||
AMOUNT_DURATION_PERIOD | AMOUNT RANGE DURATION_PAST_PERIOD | 5 years ago | |
AMOUNT RANGE DURATION_PRESENT_PERIOD | 5 years now | ||
AMOUNT RANGE DURATION_FUTURE_PERIOD | 5 years later, 9 months after | ||
AMOUNT_DURATION | AMOUNT RANGE DURATION_INDICATOR | 15 months | |
PERIOD_AMOUNT_DURATION | PAST_DETERMINER RANGE AMOUNT_DURATION | last 15 weeks, last 2 years | |
PRESENT_DETERMINER RANGE AMOUNT_DURATION | about 3 monts, around five years | ||
FUTURE_DETERMINER RANGE AMOUNT_DURATION | next 15 weeks, after 2 years | ||
INTERVAL | DURATION_PERIOD | PERIOD_DURATION | TIME_PERIOD | PERIOD_TIME | AMOUNT_TIME_PERIOD | AMOUNT_TIME | PERIOD_AMOUNT_TIME | AMOUNT_DURATION_PERIOD | AMOUNT_DURATION | PERIOD_AMOUNT_DURATION |
FREQUENCY
FREQUENCY_ITEM | hourly | daily | weekly | bi-weekly | biweekly | monthly | yearly | annually | |
FREQUENCY_INDICATOR | times | times a | times an | both times | |
PER_INDICATOR | per | / | FREQUENCY_INDICATOR | |
PER_SECOND | PER_INDICATOR RANGE SECOND | /second, times a second |
PER_MINUTE | PER_INDICATOR RANGE MINUTE | per minute, /minute |
PER_HOUR | PER_INDICATOR RANGE HOUR | hourly | per hour, times an hour |
PER_DAY | PER_INDICATOR RANGE DAY | daily | nightly | / day, per day |
PER_WEEK | PER_INDICATOR RANGE WEEK | weekly, bi-weekly | biweekly | per week, /week |
PER_MONTH | PER_INDICATOR RANGE MONTH | monthly | bi-monthly | bimonthly | /month, times a month |
PER_YEAR | PER_INDICATOR RANGE YEAR | yearly | annually | per year, /year |
PER_DECADE | PER_INDICATOR RANGE DECADE | times a year, per year |
PER_TIMEINDICATOR | PER_SECOND | PER_MINUTE | PER_HOUR | PER_DAY | PER_WEEK | PER_MONTH | PER_YEAR | PER_DECADE |
per min, per hour, /min, /hour |
PER_DURATION_INDICATOR | PER_INDICATOR RANGE DURATION_INDICATOR | per day, per week, /week, /month |
AMOUNT_PER_TIME_INDICATOR | AMOUNT RANGE PER_TIME_INDICATOR | 5 per min, per hour, 24 mg /min |
AMOUNT_FREQUENCY | AMOUNT RANGE FREQUENCY_INDICATOR | 5 times |
AMOUNT_FREQUENCY_DURATION | AMOUNT_FREQUENCY RANGE DURATION_INDICATOR | 5 times a day |
FREQUENCY_DURATION | FREQUENCY_INDICATOR RANGE DURATION_INDICATOR | times a day |
FREQUENCY_TIME | FREQUENCY_INDICATOR RANGE TIME_INDICATOR | times a hour |
PERIOD_FREQUENCY_DURATION | PERIOD_DETERMINER RANGE FREQUENCY_INDICATOR | several times a day |
PERIOD_FREQUENCY_TIME | PERIOD_DETERMINER RANGE FREQUENCY_TIME | several times a day |
AMOUNT_FREQUENCY_TIME | AMOUNT RANGE FREQUENCY_TIME | several times a day |
AMOUNT_PER_TIME | AMOUNT RANGE PER_TIME_INDICATOR | 5 per min, per hour, 24 mg /min |
AMOUNT_PER_DURATION | AMOUNT RANGE FREQUENCY_TIME | 5 per day, 10 per week |
FREQUENCY | PER_TIME_INDICATOR | PER_DURATION_INDICATOR | AMOUNT_FREQUENCY_DURATION | PERIOD_FREQUENCY_DURATION | PERIOD_FREQUENCY_TIME | AMOUNT_FREQUENCY_TIME | AMOUNT_PER_TIME | AMOUNT_PER_DURATION | FREQUENCY_ITEM |
DOSAGE
CUBIC_CENTIMETER | cc | ccs | cubic c | cubic cs | cubic centimeter | cubic centimeters | cubic centimetres | cubic centimetre | cubic centi-meter | cubic centi-meters | cubic centi-metre | cubic centi-metres | |
BAG | bag | bags | |
POUND | lb | lbs | pound | pounds | |
GRAM | g | gs | gm | gms | gram | grams | |
MILLIGRAM | mg | mgs | milligram | milligrams | milli-gram | milli-grams | |
MICROGRAM | ug | ugs | mcg | mcgs | microgram | micrograms | micro-gram | micro-grams | |
KILOGRAM | kg | kgs | kilogram | kilograms | kilo-gram | kilo-grams | |
LITER | litre | litres | liter | liters | |
MILLILITER | ml | mls | millilitre | millilitres | milliliter | milliliters | milli-litre | milli-litres | milli-liter | milli-liters | |
MICROLITER | mcl | mcls | microlitre | microlitres | microliter | microliters | micro-litre | micro-litres | micro-liter | micro-liters | |
OUNCE | oz | ozs | ounce | ounces | |
TABLET | tablet | tablets | tab | tabs | |
UNIT | CUBIC_CENTIMETER | BAG | POUND | GRAM | MILLIGRAM | MICROGRAM | KILOGRAM | LITER | MILLILITER | MICROLITER | OUNCE | TABLET | |
NUMERIC_AMOUNT_UNIT | NUMBER_AMOUNT | UNIT |
1-5 grams, 2 mcg |
WORDED_NUMERIC_AMOUNT_UNIT | WORD_AMOUNT | UNIT |
hundred milligrams, one ecstasy tablet |
DOSAGE | NUMERIC_AMOUNT_UNIT | WORDED_NUMERIC_AMOUNT_UNIT |
Lexicon Nonterminals
PRONOUN
DEMONSTRATIVE_PRONOUN | this | that | these | those | |
PERSONAL_PRONOUN | i | me | you | she | her | he | him | it | we | us | they | them | |
POSSESSIVE_PRONOUN | my | our | ours | your | yours | his | her | hers | its | their | theirs | mine | |
REFLEXIVE_PRONOUN | myself | ourselves | yourself | yourselves | himself | herself | itself | themselves | |
RELATIVE_PRONOUN | that | which | who | whom | whose | whichever | whoever | whomever | |
INDEFINITE_PRONOUN | anybody | anyone | anything | each | either | everybody | everyone | everything | neither | nobody | no one | nothing | one | somebody | someone | something | both | few | many | several | all | any | most | none | some | |
INTERROGATIVE_PRONOUN | what | who | which | whom | whose |
INTENSITY
LOW | low | very low | lower | lower than | lowest | small | very small | smaller | smaller than | smallest | less | less than | less is more | least | |
AVERAGE | average | ideal | |
HIGH | high | very high | higher | highest | large | very large | larger | largest | more | most | excess | excessive |
ROA (Route-of-Administration)
ENTERAL | ate | chewing | drink | eat | insufflate | plug | plugged | smoke | smoked | sniff | snort |
EPIDURAL | inject | injected | injection |
INTRAARTERIAL | IV | IVed | IV’ed | IVing | IV’ing | inject | injected | injection |
INTRACARDIAC | inject | injected | injection |
INTRACEREBRAL | inject | injected | injection |
INTRADERMAL | IV | IV’ed | IVing | inject | injected | injection | sniff | snort | snorting | bumping | railing | doozing |
INTRAMUSCULAR | inject | injected | injection | skin poppin |
INTRAVENOUS | IV | IVed | IV’ed | IVing | IV’ing | inject | injected | injection |
INHALATIONAL | smoke | smokes | smoked | smoking | sniff | sniffed | sniffing |snort | snorted | snorting | bumping | railing | doozing |
INTRAPERITONEAL | inject | injected | injection |
INTRATHECAL | inject | injected | injection |
INTRAOSSEOUS INFUSION | inject | injected | injection |
NASAL | sniff | snort | snorting | bumping | railing | doozing |
PARENTERAL | inject | injected | injection |
TRANSDERMAL | patch | patches |
TRANSMUCOSAL | snort | snorted | snorting | sniff | sniffed | sniffing | bumping | railing | doozing |
TOPICAL | patch | patches |
SUBCUTANEOUS | inject | injected | injection |
Lexico-ontology Nonterminals
SIDEEFFECT
MILD | bruising | itching | itching of skin | tingling | tingling in arms | tingling in hands | tingling legs | tingling in body parts | burning in fingers | burning in toes | burning in feet | burning in body parts | changes in behavior | cold | cold hands | cold feet | numbing of hands | numbing of feet | numbing of fingers | numbness of hands | numbness in feet | numbness in toes | numbness in fingers | nodding | muscle pain | muscle stiffness | muscle cramps | muscle weakness | muscle aches | muscle tenderness | loss of appetite | loss of thirst | lightheadedness | light-colored stool | redness | leg redness | swelling of the eyelid | redness of the eyelid | light-colored bowel movement | leg pain | leg swelling | leg tenderness | lack of sweating | lack of energy | itching sensation | burning sensation | irritation at the site of application | irritation at the injection site | increased thirst | increased sensitivity to light | increased sensitivity to glare | increased sensitivity to sun | inability to pass gas | inability to have a bowel movement | ill effects | hoarseness | frequent urination | frequent urge to urinate | tiredness | sore throat | fertility problem | pain in arm | pain in leg | pain in the back | pain in side | temporary blurred vision | pain in stomach | pain in the joints | pain in the upper right part of the stomach | fatigue | feeling anxious | aching pain in the hips | aching pain in the groin | difficulty doing exercise | aching pain in the thighs | swelling in the big toe | pale stools | dark stools | black stools | pale skin | paleness | paleness of tongue | paleness of lips | paleness of palms | gray |